Indonesian cities are cities that can be founded by the Indonesian civilization in Civilization V and its expansions. The first city founded is the 
Capital, and the names of future cities are chosen in the order they appear on the list below.
The names listed are default names; players can change their cities' names if they choose.
| Founding Order | City Name | Notes |
|---|---|---|
| 1 | Jakarta | Formerly a city-state; current capital of Indonesia, previously called Batavia and Djakarta |
| 2 | Surabaya | Second largest city in Indonesia |
| 3 | Medan | Largest city on the island of Sumatra |
| 4 | Makassar | Previously Ujung Pandang, 1971–1999; largest city on the island of Sulawesi |
| 5 | Batam | Largest city in the Riau Islands |
| 6 | Denpasar | Largest city on the island of Bali |
| 7 | Samarinda | Largest city on the island of Kalimantan |
| 8 | Mataram | Largest city on the island of Lombok |
| 9 | Ambon | Largest city in the Maluku Islands |
| 10 | Bandung | Third largest city in Java |
| 11 | Kupang | Largest city in Timor Islands |
| 12 | Depok | Location of the University of Indonesia |
| 13 | Palembang | Former capital of Srivijaya Kingdom |
| 14 | Trowulan | Ancient capital of Majapahit Kingdom |
| 15 | Semarang | Capital city of Central Java |
| 16 | Jayapura | Largest city in the Indonesian Papua |
| 17 | Tangerang | Sixth largest city in Indonesia |
| 18 | Bogor | City on the island of Java |
| 19 | Pekanbaru | Capital of Riau, province in Indonesia |
| 20 | Bandar Lampung | Capital of Lampung province, Indonesia |
| 21 | Malang | Second largest city in East Java |
| 22 | Padang | Capital of the West Sumatra province, Indonesia |
| 23 | Ternate | Former capital of Ternate Sultanate |
| 24 | Banjarmasin | Capital of South Kalimantan, Indoneisa |
| 25 | Pontianak | Capital of West Kalimantan, Indonesia |
| 26 | Cimahi | A major textile producer and home to military facilities |
| 27 | Balikpapan | Major seaport on the east coast of Borneo |
| 28 | Jambi | A province in Indonesia |
| 29 | Komodo | Not a city, but an island inhabited by Komodo dragons; leading candidate in the New7Wonders of Nature campaign |
| 30 | Solo | Also called Surakarta |
| 31 | Biak | An Indonesian province and island |
| 32 | Djawa | Not a city, but an island (Java) |
| 33 | Kudus | Located near Semarang |
| 34 | Lombok | Not a city, but an island |
| 35 | Samosir | Not a city, but an island located in the middle of Toba Lake |
| 36 | Sragen | Central Java |
| 37 | Garut | Located near Bandung |
| 38 | Gresik | Located near Surabaya |
| 39 | Nias | Not a city, but an island located in the west of Sumatra |
| 40 | Madiun | Located in Central Java |
| 41 | Yogyakarta | Also called Jogjakarta or Jogja for short |
| 42 | Bima | Largest city on the island of Sumbawa |
| 43 | Sorong | Westernmost city on the island of New Guinea; conquered by the Indonesians after 1960 |